Opening spectra in Sparky
From NMR Wiki
NOTE: Sparky commands shown in bold
Sparky opens three types of files:
- .ucsf - binary raw data files
- .save - plain text files containing information about spectrum display and link to corresponding .ucsf file
- .proj - plain text project files containing links to .save files and more project-specific information
Opening files with menu's
Go to 'File' menu, click 'Open...', select appropriate .ucsf or .save file and click 'Open' button.
If you are starting with .ucsf file (raw data file), then you may need to:
- start sparky
- recommended: change keyboard delay setting to make interaction with software easier
- adjust display aspect ratio (vt)
- adjust contour levels (ct)
- select colors for the spectrum (also in ct)
- when opening 3D and 4D spectra you might need to select which plane is to be displayed
Opening files from command line
On Unix systems you can simply type:
sparky somefile.ucsf
or
sparky somefile.save
or
sparky somefile.proj
Then you may have to adjust spectrum display as described in the previous section